Computational Aspects of Molecular Structure- lecture notes
Course #605.791.7
Instructors:
dr. Teresa Przytycka and
dr. Anna Panchenko
The lecture notes will be posted before each class.
- Jan 30. Intorduction and Protein Sequence analysis
Instructor - dr. Teresa Przytycka
- Feb 6. General principles of DNA/RNA structure and stability. Instructor: dr. Anna Panchenko
- Feb 13. Protein thermodynamics and stability. Instructor: dr. Anna Panchenko.
- Feb 20. Predicting secondary and super-secondary structures (coiled coil, trans-membrane helices). Instructor: dr. Teresa Przytycka
- Feb 27. Fold classification, domain definition, predicting domain boundaries. Instructor: dr. Anna Panchenko.
- Mar 5.
Algorithms for "ab inition" protein folding.
Instructor dr. Teresa Przytycka
- Mar 12.
Structure-structure alignment
Instructor: dr. Teresa Przytycka.
- Mar 26.
RNA secondary structure
Instructor: dr. Teresa Przytycka.
- Apr 2.
Protein - protein interactions instructor Teresa Przytycka
- Apr 9.
Protein-Protein interactions (cont)
Instructor: dr. Anna Panchenko.
- Apr 16.
Structural aspects of signalling
Instructor: dr. Anna Panchenko.
- Apr 23.
Evolution of Protein Structure.
Instructor: dr. Anna Pabchenko.
- Apr 30. Review and discussion.
Instructor: dr. Anna Panchenko and /or dr. Teresa Przytycka
- May 7, Exam
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