Computational Aspects of Molecular Structure- lecture notes
Course #605.791.7
The lecture notes will be posted before each class.
- Jan 31. Intorduction and Protein Sequence analysis
Instructor - dr. Teresa Przytycka
- Feb 7. General principles of DNA/RNA structure and stability. Instructor: dr. Anna Panchenko
- Feb 14. Protein thermodynamics and stability. Instructor: dr. Anna Panchenko.
- Feb 21. Predicting secondary and super-secondary structures (coiled coil, trans-membrane helices). Instructor: dr. Teresa Przytycka
- Feb 28. Fold classification, domain definition, predicting domain boundaries. Instructor: dr. Anna Panchenko.
- Mar 6.
Algorithms for "ab inition" protein folding.
Instructor dr. Teresa Przytycka
- Mar 13.
Protein structure prediction and design.
Instructor: dr. Anna Panchenko.
- Mar 27.
Structure-structure alignment
Instructor: dr. Teresa Przytycka.
- Apr 3.
Protein - protein interactions : Part 1; instructor Anna Panchenko
- Apr 10.
Protein-Protein interaction and protein interaction network. Part 2.
Instructor: dr. Teresa Przytycka.
- Apr 17.
Evolution of protein function and structure.
Instructor: dr. Anna Panchenko.
- Apr 24.
RNA folding.
Instructor: dr. Teresa Przytycka.
- May 1. Review and discussion.
Instructor: dr. Anna Panchenko and /or dr. Teresa Przytycka
- May 8, Exam
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